Dataset Open Access

Dataset to: Environmental controls of dark CO2 fixation in wetland microbiota

Grüterich, Luise; Woodhouse, Jason Nicholas; Mueller, Peter; Tiemann, Amos; Ruscheweyh, Hans-Joachim; Sunagawa, Shinichi; Grossart, Hans-Peter; Streit, Wolfgang R.


JSON-LD (schema.org) Export

{"@context":"https://schema.org/","@id":"http://doi.org/10.25592/uhhfdm.12483","@type":"Dataset","creator":[{"@id":"https://orcid.org/0000-0002-6819-007X","@type":"Person","affiliation":"University of Hamburg","name":"Gr\u00fcterich, Luise"},{"@id":"https://orcid.org/0000-0003-1129-5396","@type":"Person","affiliation":"University of Hamburg; Leibniz Institute of Freshwater Biology and Inland Fisheries","name":"Woodhouse, Jason Nicholas"},{"@id":"https://orcid.org/0000-0001-6974-5498","@type":"Person","affiliation":"M\u00fcnster University","name":"Mueller, Peter"},{"@type":"Person","affiliation":"University of Hamburg","name":"Tiemann, Amos"},{"@id":"https://orcid.org/0000-0001-7473-6086","@type":"Person","affiliation":"ETH Zurich","name":"Ruscheweyh, Hans-Joachim"},{"@id":"https://orcid.org/0000-0003-3065-0314","@type":"Person","affiliation":"ETH Zurich","name":"Sunagawa, Shinichi"},{"@id":"https://orcid.org/0000-0002-9141-0325","@type":"Person","affiliation":"Leibniz Institute of Freshwater Biology and Inland Fisheries; Potsdam University","name":"Grossart, Hans-Peter"},{"@id":"https://orcid.org/0000-0001-7617-7396","@type":"Person","affiliation":"University of Hamburg","name":"Streit, Wolfgang R."}],"datePublished":"2023-06-07","description":"<p>This dataset supports the paper: &quot;Environmental controls of dark CO<sub>2</sub> fixation in wetland microbiota&quot;.</p>\n\n<p>It contains genecluster abundances, annotations, taxonomy and membership for the metagenomic and metatranscriptomic analyses aswell as ASV tables for the 16S rRNA gene analyses.</p>","distribution":[{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/16S_DADA2_ASV.csv","encodingFormat":"csv"},{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/16S_DADA2_TAXA.csv","encodingFormat":"csv"},{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/16S_PHYLOSEQ.RDS","encodingFormat":"rds"},{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/gene_cluster_abundances_STRE22-1_MAGS_9590_insertcounts.lengthnorm.profile.cellab.profile.gz","encodingFormat":"gz"},{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/gene_cluster_annotations_STRE22-1_MAGS_9590_kegg-annotations.tsv.gz","encodingFormat":"gz"},{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/gene_cluster_membership_STRE22-1_MAGS_9590.clstr.gz","encodingFormat":"gz"},{"@type":"DataDownload","contentUrl":"https://www.fdr.uni-hamburg.de/api/files/9d7fd162-6929-4552-9de8-96d4ccc71ba8/gene_taxonomy_STRE22-1.prok.genomes_2_gtdb.tsv.gz","encodingFormat":"gz"}],"identifier":"http://doi.org/10.25592/uhhfdm.12483","inLanguage":{"@type":"Language","alternateName":"eng","name":"English"},"keywords":["Wood-Ljungdahl pathway, reverse TCA cycle, metagenomics, metatranscriptomics"],"license":"https://creativecommons.org/licenses/by/4.0/legalcode","name":"Dataset to: Environmental controls of dark CO2 fixation in wetland microbiota","url":"https://www.fdr.uni-hamburg.de/record/12483"}

Cite record as