Journal article Open Access

Federated privacy-aware microbiome profiling for colorectal cancer detection

Probul, Niklas; Klemm, Julian; Barbet, Pauline; Le Chatelier, Emmanuelle; Berland, Magali; Saak, Christina Caroline; Ehrlich, Stanislav Dusko; Pons, Nicolas; O'Toole, Paul W.; Almeida, Mathieu; Baumbach, Jan

MARC21 XML Export

<?xml version='1.0' encoding='UTF-8'?>
<record xmlns="http://www.loc.gov/MARC21/slim">
  <leader>00000nam##2200000uu#4500</leader>
  <datafield tag="909" ind1="C" ind2="O">
    <subfield code="o">oai:fdr.uni-hamburg.de:17645</subfield>
    <subfield code="p">user-uhh</subfield>
  </datafield>
  <datafield tag="773" ind1=" " ind2=" ">
    <subfield code="a">10.25592/uhhfdm.17644</subfield>
    <subfield code="i">isVersionOf</subfield>
    <subfield code="n">doi</subfield>
  </datafield>
  <datafield tag="260" ind1=" " ind2=" ">
    <subfield code="c">2025-06-19</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">581273</subfield>
    <subfield code="u">https://www.fdr.uni-hamburg.de/record/17645/files/federated-microbiome-analysis.zip</subfield>
    <subfield code="z">md5:040e24730c2666968f37ed8f850ebdfd</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">14127032</subfield>
    <subfield code="u">https://www.fdr.uni-hamburg.de/record/17645/files/figures.zip</subfield>
    <subfield code="z">md5:cc625c21251442d0325f0ae02069bbb8</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">102781261</subfield>
    <subfield code="u">https://www.fdr.uni-hamburg.de/record/17645/files/raw_results.zip</subfield>
    <subfield code="z">md5:7133f5591772e2039372ba1f6aeb5f23</subfield>
  </datafield>
  <datafield tag="856" ind1="4" ind2=" ">
    <subfield code="s">92220420</subfield>
    <subfield code="u">https://www.fdr.uni-hamburg.de/record/17645/files/tables.zip</subfield>
    <subfield code="z">md5:239afc16f6726a967825507db8f6a4ff</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Klemm, Julian</subfield>
    <subfield code="u">University of Hamburg</subfield>
    <subfield code="0">(orcid)0009-0005-8173-8158</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Barbet, Pauline</subfield>
    <subfield code="u">INRAE</subfield>
    <subfield code="0">(orcid)0000-0003-3106-3883</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Le Chatelier, Emmanuelle</subfield>
    <subfield code="u">INRAE</subfield>
    <subfield code="0">(orcid)0000-0002-2724-0536</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Berland, Magali</subfield>
    <subfield code="u">INRAE</subfield>
    <subfield code="0">(orcid)0000-0002-6762-5350</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Saak, Christina Caroline</subfield>
    <subfield code="u">University of Hamburg</subfield>
    <subfield code="0">(orcid)0000-0001-7041-8531</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Ehrlich, Stanislav Dusko</subfield>
    <subfield code="u">University College London</subfield>
    <subfield code="0">(orcid)0000-0002-7563-4046</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Pons, Nicolas</subfield>
    <subfield code="u">INRAE</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">O'Toole, Paul W.</subfield>
    <subfield code="u">University College Cork</subfield>
    <subfield code="0">(orcid)0000-0001-5377-0824</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Almeida, Mathieu</subfield>
    <subfield code="u">INRAE</subfield>
    <subfield code="0">(orcid)0000-0003-4971-0049</subfield>
  </datafield>
  <datafield tag="700" ind1=" " ind2=" ">
    <subfield code="a">Baumbach, Jan</subfield>
    <subfield code="u">Max-Planck-Institut für Informatik, Rothamsted Research, Syddansk Universitet, Technical University Munich, University of California Berkeley, University of California San Francisco, Universität Bielefeld, Universität Bielefeld Arbeitsgruppe Genominformatik, Universität Hamburg</subfield>
    <subfield code="0">(orcid)0000-0002-0282-0462</subfield>
  </datafield>
  <datafield tag="542" ind1=" " ind2=" ">
    <subfield code="l">open</subfield>
  </datafield>
  <controlfield tag="001">17645</controlfield>
  <datafield tag="245" ind1=" " ind2=" ">
    <subfield code="a">Federated privacy-aware microbiome profiling for colorectal cancer detection</subfield>
  </datafield>
  <controlfield tag="005">20250718115954.0</controlfield>
  <datafield tag="650" ind1="1" ind2="7">
    <subfield code="a">cc-by</subfield>
    <subfield code="2">opendefinition.org</subfield>
  </datafield>
  <datafield tag="041" ind1=" " ind2=" ">
    <subfield code="a">eng</subfield>
  </datafield>
  <datafield tag="540" ind1=" " ind2=" ">
    <subfield code="u">https://creativecommons.org/licenses/by/4.0/legalcode</subfield>
    <subfield code="a">Creative Commons Attribution 4.0 International</subfield>
  </datafield>
  <datafield tag="024" ind1=" " ind2=" ">
    <subfield code="a">10.25592/uhhfdm.17645</subfield>
    <subfield code="2">doi</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">publication</subfield>
    <subfield code="b">article</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">Microbiome</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">Federated learning</subfield>
  </datafield>
  <datafield tag="653" ind1=" " ind2=" ">
    <subfield code="a">Colorectal Cancer</subfield>
  </datafield>
  <datafield tag="100" ind1=" " ind2=" ">
    <subfield code="a">Probul, Niklas</subfield>
    <subfield code="u">University of Hamburg</subfield>
    <subfield code="0">(orcid)0000-0002-5793-0626</subfield>
  </datafield>
  <datafield tag="980" ind1=" " ind2=" ">
    <subfield code="a">user-uhh</subfield>
  </datafield>
  <datafield tag="520" ind1=" " ind2=" ">
    <subfield code="a">&lt;p&gt;Supplement for the publication &amp;#39;Federated privacy-aware microbiome profiling for colorectal cancer detection&amp;#39;, including code, raw results, summary tables and figures.&lt;/p&gt;</subfield>
  </datafield>
</record>
Publication date:
June 19, 2025
DOI:
10.25592/uhhfdm.17645

DOI Badge

Markdown 

[![DOI](https://www.fdr.uni-hamburg.de/badge/DOI/10.25592/uhhfdm.17645.svg)](https://doi.org/10.25592/uhhfdm.17645)

reStructedText 

.. image:: https://www.fdr.uni-hamburg.de/badge/DOI/10.25592/uhhfdm.17645.svg
   :target: https://doi.org/10.25592/uhhfdm.17645

HTML 

<a href="https://doi.org/10.25592/uhhfdm.17645"><img src="https://www.fdr.uni-hamburg.de/badge/DOI/10.25592/uhhfdm.17645.svg" alt="DOI"></a>

Image URL 

https://www.fdr.uni-hamburg.de/badge/DOI/10.25592/uhhfdm.17645.svg

Target URL 

https://doi.org/10.25592/uhhfdm.17645

Keyword(s):
Microbiome Federated learning Colorectal Cancer
Communities:
License (for files):
Creative Commons Attribution 4.0 International

Versions

Version 1.0 10.25592/uhhfdm.17645 Jun 19, 2025
Cite all versions? You can cite all versions by using the DOI 10.25592/uhhfdm.17644. This DOI represents all versions, and will always resolve to the latest one.

Cite record as

Export